Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pde6aP27664 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6aP27664 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6aP27664 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6aP27664 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.99□□□□□ -0.33
Pde6aP27664 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6aP27664 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pde6aP27664 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.99□□□□□ -0.33
Pde6aP27664 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pde6aP27664 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pde6aP27664 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.98□□□□□ -0.33
Pde6aP27664 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm12516-201ENSMUST00000120819 385 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Gm13937-201ENSMUST00000121000 988 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pde6aP27664 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pde6aP27664 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pde6aP27664 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.98□□□□□ -0.33
Pde6aP27664 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pde6aP27664 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pde6aP27664 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.97□□□□□ -0.33
Pde6aP27664 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Snord55-201ENSMUST00000174939 79 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 Gm9369-201ENSMUST00000196009 733 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Id2-203ENSMUST00000222667 958 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Pde6aP27664 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.97□□□□□ -0.33
Pde6aP27664 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pde6aP27664 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pde6aP27664 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6aP27664 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Pde6aP27664 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pde6aP27664 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.96□□□□□ -0.33
Pde6aP27664 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms