Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm20493-201ENSMUST00000173706 213 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Mir6359-201ENSMUST00000183668 81 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm29543-201ENSMUST00000188138 967 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm43866-201ENSMUST00000203894 839 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.55□□□□□ -0.24
NpcdF8VQB8 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Snord23-201ENSMUST00000116828 109 ntBASIC13.55□□□□□ -0.24
NpcdF8VQB8 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Gm43811-201ENSMUST00000202862 695 ntBASIC13.55□□□□□ -0.24
NpcdF8VQB8 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.55□□□□□ -0.24
NpcdF8VQB8 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NpcdF8VQB8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.54□□□□□ -0.24
NpcdF8VQB8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.54□□□□□ -0.24
NpcdF8VQB8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Gm8111-201ENSMUST00000117659 987 ntBASIC13.54□□□□□ -0.24
NpcdF8VQB8 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
NpcdF8VQB8 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms