Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm4986-201ENSMUST00000119731 549 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm37806-201ENSMUST00000194524 6387 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm40466-201ENSMUST00000212174 422 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Snora73a-201ENSMUST00000082453 205 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.98□□□□□ -0.81
Ssr3Q9DCF9 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm14644-201ENSMUST00000116671 647 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm29127-201ENSMUST00000188304 517 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm44062-201ENSMUST00000203312 4857 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssr3Q9DCF9 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms