Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm8566-201ENSMUST00000120174 465 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm11450-201ENSMUST00000121144 333 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm8100-201ENSMUST00000182906 988 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm9797-202ENSMUST00000218003 294 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Rpusd4Q9CWX4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm11941-201ENSMUST00000119904 610 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rpusd4Q9CWX4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms