Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm14913-201ENSMUST00000120011 1093 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm15197-201ENSMUST00000120526 478 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm3726-201ENSMUST00000203110 785 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm11628-201ENSMUST00000117568 171 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm15528-201ENSMUST00000117821 864 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm9135-201ENSMUST00000182963 990 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm45120-201ENSMUST00000208880 408 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm10020-201ENSMUST00000081993 612 ntBASIC11.08□□□□□ -0.64
Pcdh19Q80TF3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms