Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm17107-201ENSMUST00000170983 553 ntBASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm6216-201ENSMUST00000182390 687 ntBASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 AC174797.2-201ENSMUST00000225835 165 ntBASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chd4Q6PDQ2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Gm7572-201ENSMUST00000182616 766 ntBASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Gm28746-201ENSMUST00000187453 380 ntBASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Gm5278-201ENSMUST00000055957 552 ntBASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd4Q6PDQ2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.11
Chd4Q6PDQ2 Gm13120-201ENSMUST00000117343 1446 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm13104-201ENSMUST00000119651 1446 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Mir181d-201ENSMUST00000102383 72 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm23595-201ENSMUST00000104306 130 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm5335-201ENSMUST00000182995 1000 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 AC159810.1-201ENSMUST00000214838 1480 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm26313-201ENSMUST00000157770 308 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Cd9-ps-201ENSMUST00000174687 650 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm6686-201ENSMUST00000178455 258 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Mir6953-201ENSMUST00000184745 68 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Gm38349-201ENSMUST00000195732 462 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms