Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Mir877-201ENSMUST00000104738 85 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm6867-201ENSMUST00000219165 425 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smarcd3Q6P9Z1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm14724-201ENSMUST00000118400 537 ntBASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm16505-201ENSMUST00000179981 232 ntBASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smarcd3Q6P9Z1 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms