Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Id2-203ENSMUST00000222667 958 ntBASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vps54Q5SPW0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Vps54Q5SPW0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm12791-201ENSMUST00000120788 655 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm3828-201ENSMUST00000121817 257 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Snord55-201ENSMUST00000174939 79 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm38210-201ENSMUST00000191944 809 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm37028-201ENSMUST00000194276 107 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps54Q5SPW0 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm8492-201ENSMUST00000182375 987 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm6439-201ENSMUST00000199849 862 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm16380-201ENSMUST00000077997 478 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm10020-201ENSMUST00000081993 612 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps54Q5SPW0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms