Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.58□□□□□ -0.56
Cxcl12P40224 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Cxcl12P40224 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Cxcl12P40224 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.58□□□□□ -0.56
Cxcl12P40224 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cxcl12P40224 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Cxcl12P40224 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm42687-201ENSMUST00000199075 164 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Cxcl12P40224 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.57□□□□□ -0.56
Cxcl12P40224 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cxcl12P40224 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cxcl12P40224 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm11473-201ENSMUST00000118980 359 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Defa-ps17-201ENSMUST00000121849 171 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm43966-201ENSMUST00000203301 612 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm6794-201ENSMUST00000203829 457 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cxcl12P40224 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.56□□□□□ -0.56
Cxcl12P40224 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cxcl12P40224 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms