Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Gm25226-201ENSMUST00000158198 123 ntBASIC10.24□□□□□ -0.77
Hmgn1P18608 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Gm38317-201ENSMUST00000195564 343 ntBASIC10.24□□□□□ -0.77
Hmgn1P18608 Gm6334-201ENSMUST00000207083 228 ntBASIC10.24□□□□□ -0.77
Hmgn1P18608 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.24□□□□□ -0.77
Hmgn1P18608 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Hmgn1P18608 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.24□□□□□ -0.77
Hmgn1P18608 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hmgn1P18608 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm23596-201ENSMUST00000104304 132 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm12247-201ENSMUST00000117585 670 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm8566-201ENSMUST00000120174 465 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm25700-201ENSMUST00000177693 110 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm16505-201ENSMUST00000179981 232 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm28071-201ENSMUST00000190355 478 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm45575-201ENSMUST00000210283 548 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Hmgn1P18608 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.23□□□□□ -0.77
Hmgn1P18608 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hmgn1P18608 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hmgn1P18608 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hmgn1P18608 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.22□□□□□ -0.77
Hmgn1P18608 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Hmgn1P18608 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.22□□□□□ -0.77
Hmgn1P18608 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.22□□□□□ -0.77
Hmgn1P18608 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.22□□□□□ -0.77
Hmgn1P18608 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms