Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.74□□□□□ -0.53
Top6blJ3QMY9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Top6blJ3QMY9 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm12986-201ENSMUST00000119037 967 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm10752-201ENSMUST00000218348 729 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm9111-201ENSMUST00000219394 709 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm25580-201ENSMUST00000083409 327 ntBASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Top6blJ3QMY9 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm12663-201ENSMUST00000118481 958 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm12791-201ENSMUST00000120788 655 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm3828-201ENSMUST00000121817 257 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm29410-201ENSMUST00000188383 694 ntBASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Top6blJ3QMY9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms