Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm14726-201ENSMUST00000120623 896 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm44353-201ENSMUST00000200618 138 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 AC151902.1-201ENSMUST00000227800 375 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Pcdhb3Q91XZ7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Pcdhb3Q91XZ7 Gm20121-201ENSMUST00000198547 1594 ntBASIC11.58□□□□□ -0.55
Pcdhb3Q91XZ7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.58□□□□□ -0.55
Pcdhb3Q91XZ7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Pcdhb3Q91XZ7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm15808-201ENSMUST00000119046 604 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm13438-201ENSMUST00000120100 573 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm8018-201ENSMUST00000173536 789 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm26238-201ENSMUST00000175538 117 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm9022-201ENSMUST00000182482 992 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm18056-201ENSMUST00000207670 568 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm18061-201ENSMUST00000208350 562 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm18063-201ENSMUST00000208529 568 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm18052-201ENSMUST00000208750 559 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Gm17910-201ENSMUST00000211038 838 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 AC154643.1-201ENSMUST00000225643 625 ntBASIC11.58□□□□□ -0.56
Pcdhb3Q91XZ7 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms