Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim29Q8R2Q0 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm8111-201ENSMUST00000117659 987 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm15615-201ENSMUST00000118876 198 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm11836-201ENSMUST00000121022 441 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm8737-201ENSMUST00000122208 642 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm18367-201ENSMUST00000176139 600 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim29Q8R2Q0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm16219-201ENSMUST00000120096 274 ntBASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm15432-201ENSMUST00000121106 195 ntBASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm4654-201ENSMUST00000183305 982 ntBASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm43378-201ENSMUST00000199336 582 ntBASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim29Q8R2Q0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim29Q8R2Q0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim29Q8R2Q0 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms