Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc87Q8CDL9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc87Q8CDL9 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm12566-201ENSMUST00000121479 359 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 B9d1os-201ENSMUST00000137010 674 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc87Q8CDL9 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm25881-201ENSMUST00000157783 103 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm18734-201ENSMUST00000172937 808 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc87Q8CDL9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms