Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm15374-201ENSMUST00000119313 844 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm13665-201ENSMUST00000120830 528 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm20482-202ENSMUST00000174729 825 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm27516-201ENSMUST00000184237 98 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm13097-201ENSMUST00000210722 397 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Lysmd4Q8CC84 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm28686-201ENSMUST00000187404 609 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 AY036118-201ENSMUST00000200021 923 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm270-201ENSMUST00000223010 976 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm26448-201ENSMUST00000082446 203 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Lysmd4Q8CC84 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms