Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Gm10537-201ENSMUST00000192625 1698 ntBASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smarca2Q6DIC0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm24161-201ENSMUST00000104592 130 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm16210-201ENSMUST00000122161 610 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Mir3100-201ENSMUST00000174918 65 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm38038-201ENSMUST00000193803 259 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 CT009550.1-201ENSMUST00000225750 864 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 AC107711.3-201ENSMUST00000228939 1035 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Gm5697-201ENSMUST00000122295 2482 ntBASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smarca2Q6DIC0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Gm3635-201ENSMUST00000212314 354 ntBASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smarca2Q6DIC0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm15793-201ENSMUST00000121857 495 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 AC158777.1-201ENSMUST00000226216 1724 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm9095-201ENSMUST00000117607 881 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm14571-201ENSMUST00000118292 570 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm16480-201ENSMUST00000120439 832 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm9097-201ENSMUST00000120514 880 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm12254-201ENSMUST00000134617 471 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm22876-201ENSMUST00000175450 298 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm34248-201ENSMUST00000200027 474 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm42588-201ENSMUST00000200538 1297 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 AC127583.1-201ENSMUST00000224351 540 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Smarca2Q6DIC0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC19.22■□□□□ 0.67
Smarca2Q6DIC0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms