Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.55□□□□□ -0.56
Sox1P53783 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 Gm25288-201ENSMUST00000122800 265 ntBASIC11.55□□□□□ -0.56
Sox1P53783 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox1P53783 Gm24466-201ENSMUST00000179978 109 ntBASIC11.55□□□□□ -0.56
Sox1P53783 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 Gm44173-201ENSMUST00000204316 132 ntBASIC11.55□□□□□ -0.56
Sox1P53783 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox1P53783 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox1P53783 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox1P53783 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.55□□□□□ -0.56
Sox1P53783 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.55□□□□□ -0.56
Sox1P53783 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox1P53783 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sox1P53783 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sox1P53783 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Gm7781-201ENSMUST00000117258 788 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Gm8302-201ENSMUST00000119217 852 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Gm14639-201ENSMUST00000120850 866 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Gm5526-201ENSMUST00000153604 423 ntBASIC11.54□□□□□ -0.56
Sox1P53783 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Gm9619-201ENSMUST00000211587 762 ntBASIC11.54□□□□□ -0.56
Sox1P53783 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox1P53783 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.54□□□□□ -0.56
Sox1P53783 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.54□□□□□ -0.56
Sox1P53783 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox1P53783 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox1P53783 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sox1P53783 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox1P53783 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Sox1P53783 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Sox1P53783 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Sox1P53783 Gm25148-201ENSMUST00000104611 123 ntBASIC11.53□□□□□ -0.56
Sox1P53783 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox1P53783 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox1P53783 Gm11191-201ENSMUST00000117231 610 ntBASIC11.53□□□□□ -0.56
Sox1P53783 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.53□□□□□ -0.56
Sox1P53783 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox1P53783 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms