Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.27□□□□□ -0.28
RFC3P40938 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RFC3P40938 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFC3P40938 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RFC3P40938 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RFC3P40938 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RFC3P40938 AL356585.2-201ENST00000625078 2396 ntBASIC13.27□□□□□ -0.29
RFC3P40938 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RFC3P40938 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.27□□□□□ -0.29
RFC3P40938 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RFC3P40938 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.27□□□□□ -0.29
RFC3P40938 AC006335.1-201ENST00000445200 547 ntBASIC13.27□□□□□ -0.29
RFC3P40938 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.27□□□□□ -0.29
RFC3P40938 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.27□□□□□ -0.29
RFC3P40938 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.27□□□□□ -0.29
RFC3P40938 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.27□□□□□ -0.29
RFC3P40938 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.27□□□□□ -0.29
RFC3P40938 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.27□□□□□ -0.29
RFC3P40938 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
RFC3P40938 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 AL590440.2-201ENST00000641973 1595 ntBASIC13.27□□□□□ -0.29
RFC3P40938 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 AC015909.3-201ENST00000572855 1794 ntBASIC13.27□□□□□ -0.29
RFC3P40938 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
RFC3P40938 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RFC3P40938 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
RFC3P40938 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.26□□□□□ -0.29
RFC3P40938 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.26□□□□□ -0.29
RFC3P40938 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
RFC3P40938 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.26□□□□□ -0.29
RFC3P40938 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.26□□□□□ -0.29
RFC3P40938 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.26□□□□□ -0.29
RFC3P40938 AL109837.1-201ENST00000603272 613 ntBASIC13.26□□□□□ -0.29
RFC3P40938 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AL353770.1-201ENST00000614915 403 ntBASIC13.26□□□□□ -0.29
RFC3P40938 AL390755.1-201ENST00000623716 2027 ntBASIC13.26□□□□□ -0.29
RFC3P40938 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RFC3P40938 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RFC3P40938 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms