Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm8712-201ENSMUST00000221090 701 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm11660-201ENSMUST00000120955 412 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm26083-201ENSMUST00000157904 193 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm2553-201ENSMUST00000215986 605 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.34□□□□□ -0.59
Cdk9Q99J95 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdk9Q99J95 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdk9Q99J95 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm23270-201ENSMUST00000104055 131 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm11500-201ENSMUST00000118237 601 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm25668-201ENSMUST00000157700 129 ntBASIC11.33□□□□□ -0.6
Cdk9Q99J95 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdk9Q99J95 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms