Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Zfp850-201ENSMUST00000099111 941 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm42975-201ENSMUST00000200612 1491 ntBASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdhb3Q91XZ7 Gm43341-201ENSMUST00000200104 1308 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm26831-201ENSMUST00000181458 1380 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Mir466f-3-201ENSMUST00000104788 94 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15103-201ENSMUST00000119893 871 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Mir3473a-201ENSMUST00000175011 78 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm26956-201ENSMUST00000182176 986 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm45259-201ENSMUST00000209217 1006 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 AC159293.2-201ENSMUST00000222289 424 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 AC154515.3-201ENSMUST00000225081 1159 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 AC115357.1-201ENSMUST00000227575 466 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb3Q91XZ7 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb3Q91XZ7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms