Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm11930-201ENSMUST00000117788 190 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm11222-201ENSMUST00000119005 738 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc28bQ8CEG5 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm23270-201ENSMUST00000104055 131 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm4310-201ENSMUST00000177847 889 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm29396-201ENSMUST00000185659 716 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm10608-202ENSMUST00000213924 676 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm7940-201ENSMUST00000218195 769 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gzmn-202ENSMUST00000225535 989 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms