Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Aph1bQ8C7N7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Mir877-201ENSMUST00000104738 85 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm14193-201ENSMUST00000105067 153 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm14592-201ENSMUST00000117201 560 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm37835-201ENSMUST00000193305 361 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Aph1bQ8C7N7 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm15528-201ENSMUST00000117821 864 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Mir1896-201ENSMUST00000122641 81 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm24074-201ENSMUST00000158178 260 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm19246-201ENSMUST00000173599 255 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm7741-201ENSMUST00000181445 989 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.1□□□□□ -0.63
Aph1bQ8C7N7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms