Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim65Q8BFW4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm23272-201ENSMUST00000104053 129 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm43058-201ENSMUST00000197645 625 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm42997-202ENSMUST00000200321 985 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm5451-201ENSMUST00000080545 579 ntBASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim65Q8BFW4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm15528-201ENSMUST00000117821 864 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm13408-201ENSMUST00000119822 798 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm16219-201ENSMUST00000120096 274 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm13935-201ENSMUST00000121859 798 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm44100-201ENSMUST00000204329 436 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm5468-202ENSMUST00000227851 682 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim65Q8BFW4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms