Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Urb1Q571H0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Urb1Q571H0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Urb1Q571H0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Erich3-203ENSMUST00000189969 3460 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Mir744-201ENSMUST00000103261 100 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm17221-201ENSMUST00000163909 481 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm17073-201ENSMUST00000168069 556 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm8384-201ENSMUST00000190905 704 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm2594-201ENSMUST00000214774 742 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Urb1Q571H0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Urb1Q571H0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm37365-201ENSMUST00000193109 409 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Gm37284-201ENSMUST00000193607 539 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 AC105408.1-201ENSMUST00000227771 802 ntBASIC10.41□□□□□ -0.74
Urb1Q571H0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Urb1Q571H0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.4□□□□□ -0.74
Urb1Q571H0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Urb1Q571H0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Urb1Q571H0 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Urb1Q571H0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Urb1Q571H0 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Urb1Q571H0 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Urb1Q571H0 Gm8152-201ENSMUST00000120842 637 ntBASIC10.4□□□□□ -0.75
Urb1Q571H0 Gm3329-201ENSMUST00000159873 556 ntBASIC10.4□□□□□ -0.75
Urb1Q571H0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Urb1Q571H0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Urb1Q571H0 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.4□□□□□ -0.75
Urb1Q571H0 Gm35960-201ENSMUST00000202712 767 ntBASIC10.4□□□□□ -0.75
Urb1Q571H0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Urb1Q571H0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms