Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm13022-201ENSMUST00000121181 285 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm14165-201ENSMUST00000121456 952 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm22146-201ENSMUST00000157397 288 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm24074-201ENSMUST00000158178 260 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm8723-201ENSMUST00000166076 820 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm8701-201ENSMUST00000169259 874 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm26976-201ENSMUST00000182929 908 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm43912-201ENSMUST00000204352 538 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm26670-202ENSMUST00000226862 340 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.84□□□□□ -0.67
Hoxc4Q08624 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hoxc4Q08624 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.83□□□□□ -0.67
Hoxc4Q08624 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm13600-201ENSMUST00000117949 744 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm37365-201ENSMUST00000193109 409 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm5302-201ENSMUST00000202130 796 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm44216-201ENSMUST00000203942 157 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm5178-201ENSMUST00000219380 898 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Capsl-202ENSMUST00000226688 739 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm8181-201ENSMUST00000062242 669 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Gm25201-201ENSMUST00000083093 170 ntBASIC10.83□□□□□ -0.68
Hoxc4Q08624 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.83□□□□□ -0.68
Hoxc4Q08624 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms