Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Sec61a1P61620 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.96□□□□□ -0.81
Sec61a1P61620 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Sec61a1P61620 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.96□□□□□ -0.82
Sec61a1P61620 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.96□□□□□ -0.82
Sec61a1P61620 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm27530-201ENSMUST00000184096 98 ntBASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.96□□□□□ -0.82
Sec61a1P61620 AU022133-201ENSMUST00000200601 873 ntBASIC9.96□□□□□ -0.82
Sec61a1P61620 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm3786-201ENSMUST00000202659 378 ntBASIC9.96□□□□□ -0.82
Sec61a1P61620 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Sec61a1P61620 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a1P61620 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm15515-201ENSMUST00000117827 822 ntBASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.95□□□□□ -0.82
Sec61a1P61620 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Sec61a1P61620 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.95□□□□□ -0.82
Sec61a1P61620 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.95□□□□□ -0.82
Sec61a1P61620 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a1P61620 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a1P61620 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.94□□□□□ -0.82
Sec61a1P61620 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a1P61620 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a1P61620 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms