Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm42867-201ENSMUST00000202995 469 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.14□□□□□ -0.63
Pdx1P52946 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pdx1P52946 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pdx1P52946 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.14□□□□□ -0.63
Pdx1P52946 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdx1P52946 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.13□□□□□ -0.63
Pdx1P52946 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm13422-201ENSMUST00000118834 504 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm11246-201ENSMUST00000120880 345 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm9550-201ENSMUST00000161130 862 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm27910-201ENSMUST00000185004 107 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.13□□□□□ -0.63
Pdx1P52946 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 Gm43058-201ENSMUST00000197645 625 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Gm43520-201ENSMUST00000197996 164 ntBASIC11.13□□□□□ -0.63
Pdx1P52946 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Pdx1P52946 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.13□□□□□ -0.63
Pdx1P52946 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Pdx1P52946 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pdx1P52946 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pdx1P52946 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pdx1P52946 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Pdx1P52946 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pdx1P52946 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pdx1P52946 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms