Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx1-2P42580 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx1-2P42580 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC13.83□□□□□ -0.19
Nkx1-2P42580 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm8731-201ENSMUST00000118088 412 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm15595-201ENSMUST00000120840 961 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Mir1896-201ENSMUST00000122641 81 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm6108-201ENSMUST00000208365 367 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm6722-201ENSMUST00000221586 390 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.83□□□□□ -0.2
Nkx1-2P42580 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx1-2P42580 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm23200-201ENSMUST00000104379 132 ntBASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm25148-201ENSMUST00000104611 123 ntBASIC13.82□□□□□ -0.2
Nkx1-2P42580 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm15374-201ENSMUST00000119313 844 ntBASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Mir6420-201ENSMUST00000185032 102 ntBASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx1-2P42580 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm5703-201ENSMUST00000186658 3973 ntBASIC13.81□□□□□ -0.2
Nkx1-2P42580 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm7851-201ENSMUST00000117574 323 ntBASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm3150-201ENSMUST00000166418 204 ntBASIC13.81□□□□□ -0.2
Nkx1-2P42580 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms