Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Upk3aQ9JKX8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm14592-201ENSMUST00000117201 560 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm14263-201ENSMUST00000117955 746 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm4917-201ENSMUST00000121452 650 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm22334-201ENSMUST00000158070 133 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm5302-201ENSMUST00000202130 796 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm8285-201ENSMUST00000208293 759 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm2875-201ENSMUST00000211333 360 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Gm10020-201ENSMUST00000081993 612 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk3aQ9JKX8 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Upk3aQ9JKX8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm25766-201ENSMUST00000104101 131 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm1848-201ENSMUST00000120711 789 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm13284-201ENSMUST00000121020 547 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm25554-201ENSMUST00000158075 113 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm24074-201ENSMUST00000158178 260 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gm30671-201ENSMUST00000214898 318 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk3aQ9JKX8 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk3aQ9JKX8 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms