Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Gm42535-201ENSMUST00000197312 1399 ntBASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim42Q9D2H5 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC115746.1-201ENSMUST00000228949 3617 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm11511-201ENSMUST00000118146 540 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm11500-201ENSMUST00000118237 601 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm21147-201ENSMUST00000186046 913 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm29013-201ENSMUST00000187431 237 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm37641-201ENSMUST00000193837 239 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm8956-201ENSMUST00000203939 825 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm2553-201ENSMUST00000215986 605 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm35638-201ENSMUST00000220724 652 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Tmem184b-205ENSMUST00000228002 3315 ntBASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim42Q9D2H5 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trim42Q9D2H5 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms