Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm18363-201ENSMUST00000221671 730 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.98□□□□□ -0.65
Rnf111Q99ML9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rnf111Q99ML9 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm8566-201ENSMUST00000120174 465 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm27552-201ENSMUST00000183351 62 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm27844-201ENSMUST00000183613 62 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm45575-201ENSMUST00000210283 548 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm5363-201ENSMUST00000211927 938 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm7940-201ENSMUST00000218195 769 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm10288-201ENSMUST00000084614 537 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm21811-201ENSMUST00000096485 930 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rnf111Q99ML9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm23200-201ENSMUST00000104379 132 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm15515-201ENSMUST00000117827 822 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm14724-201ENSMUST00000118400 537 ntBASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.96□□□□□ -0.65
Rnf111Q99ML9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms