Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm14726-201ENSMUST00000120623 896 ntBASIC11.37□□□□□ -0.59
Cdk9Q99J95 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Gm20482-202ENSMUST00000174729 825 ntBASIC11.37□□□□□ -0.59
Cdk9Q99J95 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.37□□□□□ -0.59
Cdk9Q99J95 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.37□□□□□ -0.59
Cdk9Q99J95 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdk9Q99J95 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.37□□□□□ -0.59
Cdk9Q99J95 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Spata33-207ENSMUST00000212760 4074 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gm37597-201ENSMUST00000191853 382 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.36□□□□□ -0.59
Cdk9Q99J95 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdk9Q99J95 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm12015-201ENSMUST00000117065 843 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm15004-201ENSMUST00000119192 630 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdk9Q99J95 Gm31256-201ENSMUST00000194705 506 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms