Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Olfml3-204ENSMUST00000169286 874 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm38151-201ENSMUST00000195085 289 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm23061-201ENSMUST00000102348 116 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm22846-201ENSMUST00000157706 270 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm8459-201ENSMUST00000162504 760 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm43184-201ENSMUST00000197247 542 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm45856-201ENSMUST00000212752 416 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gm6867-201ENSMUST00000219165 425 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Cts7-204ENSMUST00000225321 1257 ntBASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Lysmd4Q8CC84 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Snord17-201ENSMUST00000104526 238 ntBASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm13296-201ENSMUST00000117854 997 ntBASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm14381-201ENSMUST00000122105 414 ntBASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Lysmd4Q8CC84 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms