Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm25998-201ENSMUST00000175397 53 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Mir1249-201ENSMUST00000116791 98 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm24954-201ENSMUST00000178831 110 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nup98Q6PFD9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Nup98Q6PFD9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nup98Q6PFD9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Mir291b-201ENSMUST00000104838 79 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm12947-201ENSMUST00000116114 420 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm5526-201ENSMUST00000153604 423 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm25226-201ENSMUST00000158198 123 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm20493-201ENSMUST00000173706 213 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm7928-201ENSMUST00000181249 701 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm37860-201ENSMUST00000195380 1034 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm43854-201ENSMUST00000200418 394 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm6478-201ENSMUST00000099450 742 ntBASIC13.08□□□□□ -0.32
Nup98Q6PFD9 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms