Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm15476-201ENSMUST00000118247 1191 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm14699-201ENSMUST00000122340 228 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm5873-201ENSMUST00000177157 1066 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm18124-201ENSMUST00000210695 706 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 AC164614.1-201ENSMUST00000216038 397 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Gm8615-201ENSMUST00000025307 771 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Col11a2Q64739 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.38□□□□□ -0.27
Col11a2Q64739 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col11a2Q64739 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm18443-201ENSMUST00000185358 556 ntBASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm37944-201ENSMUST00000194233 414 ntBASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm42908-201ENSMUST00000197508 870 ntBASIC13.37□□□□□ -0.27
Col11a2Q64739 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.37□□□□□ -0.27
Col11a2Q64739 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.37□□□□□ -0.27
Col11a2Q64739 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col11a2Q64739 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm12377-201ENSMUST00000118656 252 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Gm6425-201ENSMUST00000136332 790 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Mir3091-201ENSMUST00000175086 76 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.36□□□□□ -0.27
Col11a2Q64739 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col11a2Q64739 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col11a2Q64739 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms