Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.48□□□□□ -0.73
Cacna1aP97445 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.48□□□□□ -0.73
Cacna1aP97445 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cacna1aP97445 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm8111-201ENSMUST00000117659 987 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ighv5-1-201ENSMUST00000193324 353 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cacna1aP97445 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Erich3-203ENSMUST00000189969 3460 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm11475-201ENSMUST00000118482 476 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm15197-201ENSMUST00000120526 478 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm26272-201ENSMUST00000179241 132 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Mir7088-201ENSMUST00000184227 86 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.47□□□□□ -0.73
Cacna1aP97445 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Id2-203ENSMUST00000222667 958 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.47□□□□□ -0.73
Cacna1aP97445 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cacna1aP97445 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cacna1aP97445 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.46□□□□□ -0.73
Cacna1aP97445 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cacna1aP97445 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Gm8152-201ENSMUST00000120842 637 ntBASIC10.46□□□□□ -0.73
Cacna1aP97445 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.46□□□□□ -0.73
Cacna1aP97445 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.46□□□□□ -0.73
Cacna1aP97445 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cacna1aP97445 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cacna1aP97445 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms