Protein–RNA interactions for Protein: P28705

Rxrg, Retinoic acid receptor RXR-gamma, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrgP28705 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.43□□□□□ -0.58
RxrgP28705 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Gm7150-201ENSMUST00000122032 981 ntBASIC11.43□□□□□ -0.58
RxrgP28705 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.43□□□□□ -0.58
RxrgP28705 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrgP28705 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Gm17877-201ENSMUST00000192578 814 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Gm38151-201ENSMUST00000195085 289 ntBASIC11.43□□□□□ -0.58
RxrgP28705 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RxrgP28705 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RxrgP28705 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.43□□□□□ -0.58
RxrgP28705 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrgP28705 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrgP28705 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
RxrgP28705 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.42□□□□□ -0.58
RxrgP28705 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
RxrgP28705 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gm25076-201ENSMUST00000104098 132 ntBASIC11.42□□□□□ -0.58
RxrgP28705 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
RxrgP28705 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Gm9136-201ENSMUST00000193368 454 ntBASIC11.42□□□□□ -0.58
RxrgP28705 Gm37028-201ENSMUST00000194276 107 ntBASIC11.42□□□□□ -0.58
RxrgP28705 Gm42657-201ENSMUST00000201746 211 ntBASIC11.42□□□□□ -0.58
RxrgP28705 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.42□□□□□ -0.58
RxrgP28705 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
RxrgP28705 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RxrgP28705 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RxrgP28705 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RxrgP28705 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
RxrgP28705 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.41□□□□□ -0.58
RxrgP28705 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RxrgP28705 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RxrgP28705 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
RxrgP28705 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RxrgP28705 Gm16166-201ENSMUST00000118291 787 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms