Protein–RNA interactions for Protein: P28229

Gjc1, Gap junction gamma-1 protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjc1P28229 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gjc1P28229 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 Gm38151-201ENSMUST00000195085 289 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Gm7003-201ENSMUST00000195089 312 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Gm18038-201ENSMUST00000197900 485 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Gm44008-201ENSMUST00000204345 412 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Gm45575-201ENSMUST00000210283 548 ntBASIC12.1□□□□□ -0.47
Gjc1P28229 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.1□□□□□ -0.47
Gjc1P28229 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.1□□□□□ -0.47
Gjc1P28229 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gjc1P28229 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gjc1P28229 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm23949-201ENSMUST00000104027 127 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm12857-201ENSMUST00000117678 592 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Gm14130-201ENSMUST00000118417 987 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.09□□□□□ -0.47
Gjc1P28229 Gm6722-201ENSMUST00000221586 390 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Gm270-201ENSMUST00000223010 976 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.09□□□□□ -0.47
Gjc1P28229 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gjc1P28229 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms