Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 BOLA2P3-201ENST00000404566 256 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 RPL7P3-201ENST00000441388 714 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 HIST2H2BB-201ENST00000449108 381 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 KLF2P4-201ENST00000451959 1225 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 CICP12-201ENST00000455801 843 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 GPR53P-205ENST00000457298 1084 ntBASIC14.74□□□□□ -0.05
CCDC78A2IDD5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCDC78A2IDD5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 SORD2P-201ENST00000558556 1069 ntBASIC14.73□□□□□ -0.05
CCDC78A2IDD5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 E2F3P2-201ENST00000447755 1422 ntBASIC14.73□□□□□ -0.05
CCDC78A2IDD5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC78A2IDD5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC78A2IDD5 PEG13-201ENST00000631594 5667 ntBASIC14.72□□□□□ -0.05
CCDC78A2IDD5 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms