Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.45□□□□□ -0.74
Phf1Q9Z1B8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm25076-201ENSMUST00000104098 132 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm22138-201ENSMUST00000158748 128 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm6485-201ENSMUST00000160676 439 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm25072-201ENSMUST00000175233 235 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm10254-201ENSMUST00000052888 867 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm8420-201ENSMUST00000097103 598 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Phf1Q9Z1B8 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm12899-201ENSMUST00000120565 551 ntBASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm11675-201ENSMUST00000121873 832 ntBASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm37905-201ENSMUST00000195310 341 ntBASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm9645-201ENSMUST00000197131 792 ntBASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.43□□□□□ -0.74
Phf1Q9Z1B8 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms