Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AL928654.5-201ENST00000624831 2501 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AC073862.5-201ENST00000624129 2027 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC01165-201ENST00000445190 1623 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AC015688.4-201ENST00000580780 1647 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 FOXO1B-201ENST00000504678 1527 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 KRT8P14-201ENST00000414254 1442 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AC073508.3-201ENST00000619697 1419 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 TSPY19P-201ENST00000418461 509 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 TSPY18P-201ENST00000441642 509 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 TSPY20P-201ENST00000450910 630 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AL138918.1-201ENST00000568306 659 ntBASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 AC104758.3-203ENST00000562938 2123 ntBASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
TRAPPC1Q9Y5R8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 MSNP1-201ENST00000511640 1732 ntBASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AC140658.5-201ENST00000438532 169 ntBASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 TARDBPP1-201ENST00000442013 1203 ntBASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 FGFR3P6-201ENST00000457012 610 ntBASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 AC063952.2-201ENST00000498792 1227 ntBASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRAPPC1Q9Y5R8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms