Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm11952-201ENSMUST00000121172 821 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm11993-201ENSMUST00000121861 820 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Snord55-201ENSMUST00000174939 79 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm24328-201ENSMUST00000175104 67 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm35960-201ENSMUST00000202712 767 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm40879-201ENSMUST00000220759 612 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm7589-201ENSMUST00000085631 534 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smarcd2Q99JR8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm42779-201ENSMUST00000198807 406 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm9353-201ENSMUST00000200472 604 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm45085-201ENSMUST00000209100 441 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smarcd2Q99JR8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smarcd2Q99JR8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms