Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx54Q8K4L0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm14176-201ENSMUST00000121302 477 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gm45090-201ENSMUST00000208775 1148 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 AC125409.3-201ENSMUST00000223488 653 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx54Q8K4L0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm9095-201ENSMUST00000117607 881 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm5510-201ENSMUST00000117826 486 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm9097-201ENSMUST00000120514 880 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm4917-201ENSMUST00000121452 650 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm18014-201ENSMUST00000183369 817 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 AC124356.1-201ENSMUST00000221469 698 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gm22341-201ENSMUST00000083775 129 ntBASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx54Q8K4L0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Ddx54Q8K4L0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms