Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm15617-201ENSMUST00000118973 771 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm5616-201ENSMUST00000165252 384 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm8741-201ENSMUST00000174736 384 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Mir7085-201ENSMUST00000184353 66 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm44651-201ENSMUST00000207343 372 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Lysmd4Q8CC84 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm24074-201ENSMUST00000158178 260 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm38321-201ENSMUST00000195053 235 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm5302-201ENSMUST00000202130 796 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm17827-201ENSMUST00000211825 742 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm6722-201ENSMUST00000221586 390 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 AA474408-201ENSMUST00000098110 3339 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Lysmd4Q8CC84 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Lysmd4Q8CC84 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms