Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm23612-201ENSMUST00000103823 110 ntBASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm15196-201ENSMUST00000121406 482 ntBASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm23576-201ENSMUST00000179918 110 ntBASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm43249-201ENSMUST00000200464 458 ntBASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp6nlQ80XC3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp6nlQ80XC3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Gm45085-201ENSMUST00000209100 441 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp6nlQ80XC3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp6nlQ80XC3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms