Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm15617-201ENSMUST00000118973 771 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Scaf4Q6PFF0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 AA474408-201ENSMUST00000098110 3339 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Olfml3-204ENSMUST00000169286 874 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 AY036118-201ENSMUST00000200021 923 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Scaf4Q6PFF0 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms