Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm16459-201ENSMUST00000121443 686 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm37197-201ENSMUST00000195607 401 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm42751-201ENSMUST00000198065 559 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm10020-201ENSMUST00000081993 612 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm23675-201ENSMUST00000157311 125 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm26119-201ENSMUST00000175601 104 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm19927-201ENSMUST00000185792 781 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm43854-201ENSMUST00000200418 394 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm6331-201ENSMUST00000217890 450 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.54□□□□□ -0.4
Hoxc6P10629 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc6P10629 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc6P10629 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.53□□□□□ -0.4
Hoxc6P10629 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc6P10629 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc6P10629 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms