Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.17□□□□□ -1.1
TtrP07309 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
TtrP07309 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 CT010447.1-201ENSMUST00000225657 1608 ntBASIC8.17□□□□□ -1.1
TtrP07309 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
TtrP07309 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 AC125409.1-201ENSMUST00000223213 3370 ntBASIC8.17□□□□□ -1.1
TtrP07309 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
TtrP07309 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
TtrP07309 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.17□□□□□ -1.1
TtrP07309 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
TtrP07309 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
TtrP07309 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC8.16□□□□□ -1.1
TtrP07309 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm17150-201ENSMUST00000165577 381 ntBASIC8.16□□□□□ -1.1
TtrP07309 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC8.16□□□□□ -1.1
TtrP07309 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.16□□□□□ -1.1
TtrP07309 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
TtrP07309 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm3096-201ENSMUST00000185770 364 ntBASIC8.16□□□□□ -1.1
TtrP07309 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.16□□□□□ -1.1
TtrP07309 AC140406.1-201ENSMUST00000226481 465 ntBASIC8.16□□□□□ -1.1
TtrP07309 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
TtrP07309 Gm5455-201ENSMUST00000058710 715 ntBASIC8.16□□□□□ -1.1
TtrP07309 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
TtrP07309 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
TtrP07309 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
TtrP07309 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.1
TtrP07309 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
TtrP07309 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
TtrP07309 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
TtrP07309 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms