Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm14942-201ENSMUST00000119642 336 ntBASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Hoxa3P02831 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm7504-201ENSMUST00000201449 424 ntBASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.53□□□□□ -0.88
Hoxa3P02831 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.53□□□□□ -0.88
Hoxa3P02831 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.53□□□□□ -0.88
Hoxa3P02831 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Hoxa3P02831 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxa3P02831 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxa3P02831 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Hoxa3P02831 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm23272-201ENSMUST00000104053 129 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm13937-201ENSMUST00000121000 988 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm11244-201ENSMUST00000121243 237 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Mir1901-201ENSMUST00000122616 78 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Mir1956-201ENSMUST00000157748 65 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm38314-201ENSMUST00000195709 625 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm44315-201ENSMUST00000203041 219 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm17825-201ENSMUST00000206836 794 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Gm7600-201ENSMUST00000209657 785 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.52□□□□□ -0.89
Hoxa3P02831 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.52□□□□□ -0.89
Hoxa3P02831 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.52□□□□□ -0.89
Hoxa3P02831 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Hoxa3P02831 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Hoxa3P02831 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms