Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm13117-201ENSMUST00000120894 691 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm12628-201ENSMUST00000122193 382 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 Mir6998-201ENSMUST00000183343 64 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm18514-201ENSMUST00000218980 436 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd3B1AR17 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd3B1AR17 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.09□□□□□ -0.63
Chd3B1AR17 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd3B1AR17 Gm13600-201ENSMUST00000117949 744 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Gm9673-201ENSMUST00000119287 781 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.08□□□□□ -0.63
Chd3B1AR17 Gm7255-201ENSMUST00000187371 908 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Mt1-202ENSMUST00000211807 1085 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Gm6390-201ENSMUST00000215034 589 ntBASIC11.08□□□□□ -0.63
Chd3B1AR17 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm12663-201ENSMUST00000118481 958 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Gm43671-201ENSMUST00000200422 433 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Chd3B1AR17 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.08□□□□□ -0.64
Chd3B1AR17 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd3B1AR17 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd3B1AR17 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chd3B1AR17 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chd3B1AR17 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Gm15197-201ENSMUST00000120526 478 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.07□□□□□ -0.64
Chd3B1AR17 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Gm43610-201ENSMUST00000199117 365 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.07□□□□□ -0.64
Chd3B1AR17 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chd3B1AR17 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms